Protein ZmOrphan70
ZmOrphan70 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan70
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: C0PLV7
Subgenome: 1

Protein ZmOrphan70

ZmOrphan70 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb285830_T001
Zm00001eb285830_T002
Zm00001eb285830_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d037949DAPseq no logo sequence fimo position
Zm00001d037949DAPseq no logo sequence fimo position
Zm00001d037949ChIPseq no logo sequence fimo position
Zm00001d037949PChIPseq no logo sequence fimo position

Interactions where ZmOrphan70 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan70 is the target  
Expand


There are 243 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb285830_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPRKSLPTGGRPCVLVCALGRRCT
CVATVADVVSWNVMVHAEEKERIRRCNGQVYCLADEPGVHRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRIS
SSDQFIILATDGVAFGLSAFNSLCKHRHMHPSFRLRKHTHCLVTDDGKREFYPIGMGRALQRRGGTYRGGDAGPGEGGQA
AGGVRRSRVEAQAARHRRR

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPRKSLPTGGRPCVLVCALGRRCT
CVATVADVVSWNVMVHAEEKERIRRCNGQVYCLADEPGVHRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRIS
SSDQFIILATDGVAFGLSAFNSLCKHRHMHPSFRLRKHTHCLVTDDGKREFYPIGMGRALQRRGGTYRGGDAGPGEGGQA
AGGVRRSRVEAQAARHRRR

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPRKSLPTGGRPCVLVCALGRRCT
CVATVADVVSWNVMVHAEEKERIRRCNGQVYCLADEPGVHRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRIS
SSDQFIILATDGVAFGLSAFNSLCKHRHMHPSFRLRKHTHCLVTDDGKREFYPIGMGRALQRRGGTYRGGDAGPGEGGQA
AGGVRRSRVEAQAARHRRR

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPRKSLPTGGRPCVLVCALGRRCT
CVATVADVVSWNVMVHAEEKERIRRCNGQVYCLADEPGVHRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRIS
SSDQFIILATDGVAFGLSAFNSLCKHRHMHPSFRLRKHTHCLVTDDGKREFYPIGMGRALQRRGGTYRGGDAGPGEGGQA
AGGVRRSRVEAQAARHRRR

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPRKSLPTGGRPCVLVCALGRRCT
CVATVADVVSWNVMVHAEEKERIRRCNGQVYCLADEPGVHRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRIS
SSDQFIILATDGVAFGLSAFNSLCKHRHMHPSFRLRKHTHCLVTDDGKREFYPIGMGRALQRRGGTYRGGDAGPGEGGQA
AGGVRRSRVEAQAARHRRR

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPRKSLPTGGRPCVLVCALGRRCT
CVATVADVVSWNVMVHAEEKERIRRCNGQVYCLADEPGVHRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRIS
SSDQFIILATDGVAFGLSAFNSLCKHRHMHPSFRLRKHTHCLVTDDGKREFYPIGMGRALQRRGGTYRGGDAGPGEGGQA
AGGVRRSRVEAQAARHRRR

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
PF00481
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

TGGATATGCCAGCCTGAGGGGCCTA...

GRMZM2G069713_T01 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPQEKERIRRCNGQVYCLADEPGV
HRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRISSSDQFIILATDGVAFGLSAFNSLCKHRHMHPSFRLRKHT
HCLVTDDGKREFYPIGMGRALQRRGGTYRGGDAGPGEGGQAAGGVRRSRVEAQAARHRRR

Nucleotide Sequence
Copy to clipboard
     
Expand

GCACCGCGCTTGTTGACTCGGCTTC...

GRMZM2G069713_T02 from maize genome v3


Related TFome: pUT6825

Amino Acid Sequence
Copy to clipboard

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPQEKERIRRCNGQVYCLADEPGV
HRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRISSSDQFIILATDGVWDVLSNDEAVHIVAGTPDRAKAAKRL
VECAVRAWRRKRRDIAVDDCSAICLFFHPPPPS

Nucleotide Sequence
Copy to clipboard
     
Expand

GCACCGCGCTTGTTGACTCGGCTTC...

GRMZM2G069713_T03 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEVS
SLSLCLPLSLLLGLCCSFCFFLPLISFGFLYWISGVIIKFVIARDISIEFFF

Nucleotide Sequence
Copy to clipboard
     
Expand

AAACCACAATTCACAGGCCCTCTCC...

Zm00001d037949_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPQEKERIRRCNGQVYCLADEPGV
HRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRISSSDQFIILATDGVWDVLSNDEAVHIVAGTPDRAKAAKRL
VECAVRAWRRKRRDIAVDDCSAICLFFHPPPPS

Nucleotide Sequence
Copy to clipboard
     
Expand

AAACCACAATTCACAGGCCCTCTCC...

Zm00001eb285830_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPQEKERIRRCNGQVYCLADEPGV
HRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRISSSDQFIILATDGVAFGLSAFNSLCKHRHMHPSFRLRKHT
HCLVTDDGKREFYPIGMGRALQRRGGTYRGGDAGPGEGGQAAGGVRRSRVEAQAARHRRR

Nucleotide Sequence
Copy to clipboard
     
Expand

TGGATATGCCAGCCTGAGGGGCCTA...

Zm00001eb285830_T003 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MRQISSLLQGLARSLSVGRDRDRDRDRKGNGAGDRKTAVPAVLRTSGTLWGDGSDTFAAVCSRRGEKGINQDCSIVWEGF
GCQEGTIFCGIFDGHGQWGHYVAKAVRDSLPPSLLCHWQEALALASLIDDGEKKLGDCQFDLWKRSYVAACAAVDDELRR
SRRLDAVQSGCTALSIVKQGDLMIVANVGDSRAVLGTTSDDGAIAAVQLTVDLKPNLPQEKERIRRCNGQVYCLADEPGV
HRVWQPSRESPGLAMSRAFGDYCVKDCGVISTPEVTQKRISSSDQFIILATDGVWDVLSNDEAVHIVAGTPDRAKAAKRL
VECAVRAWRRKRRDIAVDDCSAICLFFHPPPPS

Nucleotide Sequence
Copy to clipboard
     
Expand

GGGCACCGCGCTTGTTGACTCGGCT...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26